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Add new outputs for fixed issue

Code was modified to allow detection of the first stop codon. The output was retested and the fixed output has been posted in this file.
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Ravi Shah 5 years ago
committed by GitHub
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  1. 22
      sample_strands.txt

22
sample_strands.txt

@ -27,12 +27,11 @@ Working as intended?: Yes.
Sample: ATACATGCCAGTCATCGTTATTC
Output:
UAA STOP codon found
The mRNA strand is: AUGUACGGUCAGUAGCAAUAA
The codons are: ['AUG', 'UAC', 'GGU', 'CAG', 'UAG', 'CAA', 'UAA']
There are 7 amino acids translated from this mRNA strand.
['Methionine', 'Tyrosine', 'Glycine', 'Glutamine', 'STOP', 'Glutamine', 'STOP']
Working as intended?: No. Doesn't recognize first stop codon.
UAG STOP codon found
The codons are: ['AUG', 'UAC', 'GGU', 'CAG', 'UAG']
There are 5 amino acids translated from this mRNA strand.
['Methionine', 'Tyrosine', 'Glycine', 'Glutamine', 'STOP']
Working as intended?: Yes. Issue fixed.
Sample: TACATGCCATACGAGACGATT
@ -66,9 +65,8 @@ Working as intended?: Yes.
Sample: TACAGGCCTTAGATCGTCATGCCATACGAGACGAGCGCGCCTAAGCGGCGCAGACTCATGGTCATT
Output:
UAA STOP codon found
The mRNA strand is: AUGUCCGGAAUCUAGCAGUACGGUAUGCUCUGCUCGCGCGGAUUCGCCGCGUCUGAGUACCAGUAA
The codons are: ['AUG', 'UCC', 'GGA', 'AUC', 'UAG', 'CAG', 'UAC', 'GGU', 'AUG', 'CUC', 'UGC', 'UCG', 'CGC', 'GGA', 'UUC', 'GCC', 'GCG', 'UCU', 'GAG', 'UAC', 'CAG', 'UAA']
There are 22 amino acids translated from this mRNA strand.
['Methionine', 'Serine', 'Glycine', 'Isoleucine', 'STOP', 'Glutamine', 'Tyrosine', 'Glycine', 'Methionine', 'Leucine', 'Cysteine', 'Serine', 'Arginine', 'Glycine', 'Phenylalanine', 'Alanine', 'Alanine', 'Serine', 'Glutamic Acid', 'Tyrosine', 'Glutamine', 'STOP']
Working as intended?: No. Doesn't recognize first stop codon.
UAG STOP codon found
The codons are: ['AUG', 'UCC', 'GGA', 'AUC', 'UAG']
There are 5 amino acids translated from this mRNA strand.
['Methionine', 'Serine', 'Glycine', 'Isoleucine', 'STOP']
Working as intended?: Yes. Issue fixed.
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