From 847b0211153cf26d39f7409367fc6b909814cb60 Mon Sep 17 00:00:00 2001
From: Ravi Shah <63246200+Rav4s@users.noreply.github.com>
Date: Fri, 13 Nov 2020 11:44:14 -0600
Subject: [PATCH] Add new outputs for fixed issue

Code was modified to allow detection of the first stop codon. The output was retested and the fixed output has been posted in this file.
---
 sample_strands.txt | 22 ++++++++++------------
 1 file changed, 10 insertions(+), 12 deletions(-)

diff --git a/sample_strands.txt b/sample_strands.txt
index 4760e6d..50f4201 100644
--- a/sample_strands.txt
+++ b/sample_strands.txt
@@ -27,12 +27,11 @@ Working as intended?: Yes.
 
 Sample: ATACATGCCAGTCATCGTTATTC
 Output:
-UAA STOP codon found
-The mRNA strand is: AUGUACGGUCAGUAGCAAUAA
-The codons are: ['AUG', 'UAC', 'GGU', 'CAG', 'UAG', 'CAA', 'UAA']
-There are 7 amino acids translated from this mRNA strand.
-['Methionine', 'Tyrosine', 'Glycine', 'Glutamine', 'STOP', 'Glutamine', 'STOP']
-Working as intended?: No. Doesn't recognize first stop codon.
+UAG STOP codon found
+The codons are: ['AUG', 'UAC', 'GGU', 'CAG', 'UAG']
+There are 5 amino acids translated from this mRNA strand.
+['Methionine', 'Tyrosine', 'Glycine', 'Glutamine', 'STOP']
+Working as intended?: Yes. Issue fixed.
 
 
 Sample: TACATGCCATACGAGACGATT
@@ -66,9 +65,8 @@ Working as intended?: Yes.
 
 Sample: TACAGGCCTTAGATCGTCATGCCATACGAGACGAGCGCGCCTAAGCGGCGCAGACTCATGGTCATT
 Output:
-UAA STOP codon found
-The mRNA strand is: AUGUCCGGAAUCUAGCAGUACGGUAUGCUCUGCUCGCGCGGAUUCGCCGCGUCUGAGUACCAGUAA
-The codons are: ['AUG', 'UCC', 'GGA', 'AUC', 'UAG', 'CAG', 'UAC', 'GGU', 'AUG', 'CUC', 'UGC', 'UCG', 'CGC', 'GGA', 'UUC', 'GCC', 'GCG', 'UCU', 'GAG', 'UAC', 'CAG', 'UAA']
-There are 22 amino acids translated from this mRNA strand.
-['Methionine', 'Serine', 'Glycine', 'Isoleucine', 'STOP', 'Glutamine', 'Tyrosine', 'Glycine', 'Methionine', 'Leucine', 'Cysteine', 'Serine', 'Arginine', 'Glycine', 'Phenylalanine', 'Alanine', 'Alanine', 'Serine', 'Glutamic Acid', 'Tyrosine', 'Glutamine', 'STOP']
-Working as intended?: No. Doesn't recognize first stop codon.
+UAG STOP codon found
+The codons are: ['AUG', 'UCC', 'GGA', 'AUC', 'UAG']
+There are 5 amino acids translated from this mRNA strand.
+['Methionine', 'Serine', 'Glycine', 'Isoleucine', 'STOP']
+Working as intended?: Yes. Issue fixed.